| Rank | Player | Club | Goals |
|---|---|---|---|
| 1 | Muhammed Arfat Ansari | India on Track FC | 18 |
| 2 | Denzil Mascarenhas | Hope United FC | 11 |
| 3 | Satish Hawaldar | GOG FC | 10 |
| 4 | Nikhil Mali | GOG FC | 9 |
| 5 | Febindas D | Snigmay Pune FC | 9 |
| 6 | Shubham Dayma | Nashik United | 8 |
| 7 | Sumit R Bhandary | GOG FC | 6 |
| 8 | Chaitan Komarpant | Hope United FC | 6 |
| 9 | Hersh Rall | India on Track FC | 5 |
| 10 | A Sekar | Kalyan East FC | 4 |
| 11 | Rishi Chauhan | Hope United FC | 4 |
| 12 | Om Sanjay Arane | Hope United FC | 4 |
| 13 | Saurabh Nikam | India on Track FC | 4 |
| 14 | Anish Gaud | Nashik United | 4 |
| 15 | Prakash Thorat | GOG FC | 3 |
| 16 | Harsh Pradhan | Kalyan East FC | 3 |
| 17 | Reginald Rajive Adhav | Nashik United | 3 |
| 18 | Durgesh Pawar | Kalyan East FC | 3 |
| 19 | Ajith Kumar S | Kalyan East FC | 3 |
| 20 | Lucky Shetke | AIYFA | 3 |
| 21 | Lalit Bangera | Hope United FC | 3 |
| 22 | Abhijit Tawhare | Hope United FC | 3 |
| 23 | Omkar Talkar | India on Track FC | 3 |
| 24 | Vaibhav Shetti | Snigmay Pune FC | 3 |
| 25 | Asadul Mubarak Khan | Hope United FC | 3 |
| 26 | Jassim Naroo | AIYFA | 3 |
| 27 | D Akash | Kalyan East FC | 2 |
| 28 | Gautam Srinivas | Magic Made Soccer FA | 2 |
| 29 | Ajay Bajantri | AIYFA | 2 |
| 30 | Saket A Kulkarni | GOG FC | 2 |
| 31 | Shrikant Molangiri | GOG FC | 2 |
| 32 | Omkar Shinde | Kalyan East FC | 2 |
| 33 | Salman Khan | Nashik United | 2 |
| 34 | Riyan Yadgiri | AIYFA | 2 |
| 35 | Raj Gaikwad | Kalyan East FC | 2 |
| 36 | Lalit V Patil | Snigmay Pune FC | 2 |
| 37 | Sudarshan S Mathur | AIYFA | 2 |
| 38 | Pragnesh B Solanki | Hope United FC | 2 |
| 39 | Mohammed Assad Sayed | AIYFA | 2 |
| 40 | Injamamul Hoque | AIYFA | 2 |
| 41 | Roshan Ashok Rikame | Firodia Shivajians | 2 |
| 42 | Paolenmoi Changloi | India on Track FC | 2 |
| 43 | Amey Bhatkal | Hope United FC | 2 |
| 44 | Dwight Dabreo | India on Track FC | 2 |
| 45 | Prateek Patil | Snigmay Pune FC | 2 |
| 46 | Shivam Yadav | Hope United FC | 2 |
| 47 | Vivan Zarthoshtimanesh | India on Track FC | 2 |
| 48 | Amol Wadekar | Snigmay Pune FC | 2 |
| 49 | Krish D Rajput | India on Track FC | 2 |
| 50 | Rollen Fernandes | India on Track FC | 2 |
| 51 | Arman Fakir | Firodia Shivajians | 2 |
| 52 | Yash Pardeshi | Snigmay Pune FC | 2 |
| 53 | Darshan Pawar | Firodia Shivajians | 2 |
| 54 | Utkarsh M Sonawane | Firodia Shivajians | 2 |
| 55 | Rahul Kadlag | GOG FC | 1 |
| 56 | Mehedi Hassan | Snigmay Pune FC | 1 |
| 57 | Shivraj V Patil | GOG FC | 1 |
| 58 | Soorya V | GOG FC | 1 |
| 59 | Mayur Gorkha | Firodia Shivajians | 1 |
| 60 | Aniket Bahot | Nashik United | 1 |
| 61 | Lawrence K | Kalyan East FC | 1 |
| 62 | Akhilesh Bandwal | Firodia Shivajians | 1 |
| 63 | Atwar Ahmed | Mumbay FC | 1 |
| 64 | Harpreet Randhawa | AIYFA | 1 |
| 65 | Pratik D Sable | Snigmay Pune FC | 1 |
| 66 | Yash Shukla | GOG FC | 1 |
| 67 | Gonde Nikhil Ramdas | GOG FC | 1 |
| 68 | Adarsh R Mache | Snigmay Pune FC | 1 |
| 69 | Dipesh A Rawat | Kalyan East FC | 1 |
| 70 | Jayraj Ghelani | India on Track FC | 1 |
| 71 | Shriniwas Patil | India on Track FC | 1 |
| 72 | Hemen Chheda | India on Track FC | 1 |
| 73 | Pradip Kanojiya | Nashik United | 1 |
| 74 | Muhammed Kaif Ansari | Mumbay FC | 1 |
| 75 | Atharv R Kadam | AIYFA | 1 |
| 76 | Kunal Raghav | India on Track FC | 1 |
| 77 | Sunny Koli | India on Track FC | 1 |
| 78 | Kaustabh Ravindra | India on Track FC | 1 |
| 79 | Rahul K | Mumbay FC | 1 |
| 80 | Rutig Ahirrao | India on Track FC | 1 |
| 81 | Sudeep Surendran | Snigmay Pune FC | 1 |
| 82 | Sachin Chandel | Snigmay Pune FC | 1 |
| 83 | Surya | Kalyan East FC | 1 |
| 84 | Abin Augustin | Kovalam FC | 1 |
| 85 | Antonio D Inacio | Hope United FC | 1 |
| 86 | Yash Dange | Mumbay FC | 1 |
| 87 | Allan Joseph Dias | GOG FC | 1 |