| Rank | Player | Club | Goals |
|---|---|---|---|
| 1 | Alaaeddine Ajaraie | NorthEast United FC | 8 |
| 2 | Luka Majcen | Diamond Harbour FC | 4 |
| 3 | Robinson Blandon | BodoLand FC | 4 |
| 4 | Clayton Silva | Diamond Harbour FC | 4 |
| 5 | Liston Colaco | Mohun Bagan | 4 |
| 6 | Makakmayum Daniyal | South United FC | 3 |
| 7 | Diamantakos Dimitrios | East Bengal FC | 3 |
| 8 | Gwgwmsar Gayary | BodoLand FC | 3 |
| 9 | Sreyas VG | Indian Navy FT | 3 |
| 10 | Everbrightson Sana Mylliempdah | Shillong Lajong FC | 3 |
| 11 | Ruatkima | Diamond Harbour FC | 3 |
| 12 | Anirudh Thapa | Mohun Bagan | 2 |
| 13 | Hamid Ahadad | East Bengal FC | 2 |
| 14 | Christopher Kamei | Indian Army FT | 2 |
| 15 | Sahal Abdul Samad | Mohun Bagan | 2 |
| 16 | Marat Tareck | Real Kashmir FC | 2 |
| 17 | Parthib Gogoi | NorthEast United FC | 2 |
| 18 | Andy Rodriguez | NorthEast United FC | 2 |
| 19 | Maharabam Maxion | Mohammedan SC | 2 |
| 20 | Bipin Singh | East Bengal FC | 2 |
| 21 | Anwar Ali | East Bengal FC | 2 |
| 22 | Sankit | Indian Airforce FT | 2 |
| 23 | Nabin Lama | Tribhuvan Army FC Nepal | 2 |
| 24 | Jobby Justin | Diamond Harbour FC | 2 |
| 25 | Phrangki Buam | Shillong Lajong FC | 2 |
| 26 | Saul Crespo | East Bengal FC | 2 |
| 27 | Suhail Ahmad Bhat | Mohun Bagan | 2 |
| 28 | Joseph Mayowa | Karbi Anglong MS FC | 2 |
| 29 | Vijay Marandi | Indian Navy FT | 2 |
| 30 | Damaitphang Lyngdoh | Shillong Lajong FC | 2 |
| 31 | Rohen Singh | Real Kashmir FC | 1 |
| 32 | Jason Cummings | Mohun Bagan | 1 |
| 33 | Jamie Maclaren | Mohun Bagan | 1 |
| 34 | Figo Syndai | Shillong Lajong FC | 1 |
| 35 | Praful Kumar | Jamshedpur FC | 1 |
| 36 | Nasir Yasa | Malaysian Armed Forces | 1 |
| 37 | Pramveer Singh | Punjab FC | 1 |
| 38 | Konsam Sanathoi Singh | Punjab FC | 1 |
| 39 | Manvir Singh | Mohun Bagan | 1 |
| 40 | Salam Ranjan Singh | Real Kashmir FC | 1 |
| 41 | Afridi Buyamayum | TRAU FC | 1 |
| 42 | De Gol | Namdhari FC | 1 |
| 43 | Aman | Namdhari FC | 1 |
| 44 | Seilenthang Lotjem | Namdhari FC | 1 |
| 45 | Dharampreet | Namdhari FC | 1 |
| 46 | Samuel Vanlalpeka | Indian Airforce FT | 1 |
| 47 | Kamalesh P | 1 Ladakh FC | 1 |
| 48 | Mebannangkiew Thabah | Rangdajied United FC | 1 |
| 49 | Jairo Samperio | NorthEast United FC | 1 |
| 50 | Thoil Singh | NorthEast United FC | 1 |
| 51 | Asheer Akhtar | NorthEast United FC | 1 |
| 52 | Redeem Tlang | NorthEast United FC | 1 |
| 53 | Pintu Mahata | Indian Navy FT | 1 |
| 54 | Moriangthem Nelson Singh | TRAU FC | 1 |
| 55 | Niranjan Dhami | Tribhuvan Army FC Nepal | 1 |
| 56 | Vignesh Vinod | 1 Ladakh FC | 1 |
| 57 | Chanambam Singh | Indian Army FT | 1 |
| 58 | Abhishek Shankar | Indian Army FT | 1 |
| 59 | Rahul Ramakrishan | Indian Army FT | 1 |
| 60 | Khan Aman | Indian Airforce FT | 1 |
| 61 | Mohammed Rashid | East Bengal FC | 1 |
| 62 | Lucas Da Silva | NEROCA FC | 1 |
| 63 | M Mbengue | Real Kashmir FC | 1 |
| 64 | Adison Singh Thokchom | Mohammedan SC | 1 |
| 65 | Lunminlen Haokip | Karbi Anglong MS FC | 1 |
| 66 | Hemraj Bhujel | ITBP FT | 1 |
| 67 | Pulung Daimary | ITBP FT | 1 |
| 68 | Akhish Cyril | Indian Airforce FT | 1 |
| 69 | Mohammed Aqib | Indian Airforce FT | 1 |
| 70 | David Lalhlansanga Hmar | East Bengal FC | 1 |
| 71 | Sajal Bag | Mohammedan SC | 1 |
| 72 | Deibormame Tongper | Shillong Lajong FC | 1 |
| 73 | Treimiki Lamurong | Shillong Lajong FC | 1 |
| 74 | Nikhil Barla | Jamshedpur FC | 1 |
| 75 | Manvir Singh Saini | Jamshedpur FC | 1 |
| 76 | Sarthak Goloui | Jamshedpur FC | 1 |
| 77 | Naorem Mahesh Singh | East Bengal FC | 1 |
| 78 | Siju S | 1 Ladakh FC | 1 |
| 79 | Mohammed Amir | Malaysian Armed Forces | 1 |
| 80 | Ashley Koli | Mohammedan SC | 1 |
| 81 | Franck William | Real Kashmir FC | 1 |
| 82 | Lalchungnunga | East Bengal FC | 1 |
| 83 | Gladdy Nelcen Kharbuli | Shillong Lajong FC | 1 |